Changes in the microbial consortium during the disposal of aged post-fermentation distillery grain using the aerobic composting method

Abstract

The change in the consortium of microorganisms during the disposal of aged post-fermentation distillery grain by aerobic composting using the biopreparation-oil destructor “Lenoil”® SHP containing microorganisms of the genera Ochrobactrum sp. and Acinetobacter sp . has been assessed. In the initial waste, microorganisms of the genera: Acidothermus sp. , Proteus sp. , Pseudomonas sp. , Bacillus sp. , Escherichia sp. , Staphylococcus sp. , and Enterobacter sp. were isolated. After the application of the biopreparation, the following genera of microorganisms were identified: Ochrobactrum sp. , Acinetobacter sp. , Pseudomonas sp. , Bacillus sp. , Escherichia sp. , Staphylococcus sp., and Enterobacter sp. The use of the biopreparation promoted the development of existing microbial populations as well as the introduction of new species. The application of the biopreparation has made it possible to increase the number of microorganisms that contribute to more effective decomposition of organic compounds and reduction of inorganic nitrogen concentration during the disposal of aged post-fermentation distillery grain using the aerobic composting method.

Full Text

Introduction Post-fermentation distillery grain is a waste, which is a liquid (suspension) of light-brown color with dry matter content - 7-9%. Distillery grain is rich in fiber, carbohydrates, proteins and microelements [1]. The formation of post-fermentation distillery grain occurs in the production of ethyl distillery at the stage of rectification, which is accompanied by the formation of at least 13 litres of grain per 1 litre of ethanol. Post-fermentation distillery grain contains amino acids, dissolved acid fermentation products, vegetable fat and nitrogen-free extracts [2]. The post-fermentation distillery grain contains dead yeast cells, ethanol derivatives, organic acids, vitamins, micro- and macro-elements [3]. The hydrogen content (pH) of fresh alcohol bars is 4.9 units, the composition includes reducing agents - 0.33%, raw protein - 37.0%, ammonium nitrogen - 1200 mg/l, phosphorus oxide (V) - 1480 mg/l, potassium - 688 mg/l, calcium - 130 mg/l, magnesium - 300 mg/l and others [4]. Before the implementation of regulatory acts regulating the disposal of post-fermentation distillery grain at enterprises, wastes were placed in earth storage tanks, and after the introduction of requirements for the treatment of such wastes, their placement was not authorized. Similar situation was created during the work of the Rozhdestvensky spirits factory, closed in 2013 due to a lawsuit by the Samara inter-district prosecutor’s office. The tanks of the distillery grain are located at a distance of 110 m from the nearest residential development v. Rozhdestveno, within the boundaries of “Samarskaya Luka National Park”. According to engineering surveys, the area of the disturbed areas was 42 hectares, and the depth of contamination of the soil with waste from the post-fermentation distillery grain was at least 10 m. The spread of pollutants from the waste occurred not only in the soil and ground, but also in underground and surface water [5]. In 2024, work began on the excavation and decontamination of an aged post-fermentation distillery grain. For a faster and more effective waste disposal, the technology of aerobic composting was applied. The work was carried out in temporary hangars on site in close proximity to the waste disposal site. The composting of waste was carried out in trapezoidal storage pits 100 m long, up to 2 m high, with a volume of about 400 m3 each. The formation of the compost mixture occurred from the initial removal of aged distillery grain (30-35% about.), immature compost after 7-10 days of composting (30-35% about.) and wood sawdust (30-35% about.). The application of immature compost at the thermophilic stage contributed to a faster warming of the compost, and wood sawdust acted as a pollutant for maintaining aerobic conditions. Due to the limited time of production and large amount of post-fermentation distillery grain, which needs to be recycled (25,000 m3), it was decided to apply “Lenoil”® SHP for further intensification of the waste recycling process with an aged post-wash bar. “Lenoil”® SHP developed by CBA NPP “Biomedchim”, protected by the patent of the Russian Federation 2553540.[28] The waste from aged distillery grain is characterized by high ammonium (up to 3700 mg/kg) and nitrite (up to 37 mg/kg) nitrogen content. The use of aerobic composting method in the recycling of post-fermentation distillery grain waste allows to intensify the process of nitrification, which reduces ammonium and nitrite nitrogen. In addition, during the composting process, the distillery grain waste is mineralized, resulting in an organomineral soil with a low organic matter content [6]. Materials and methods To analyze the effectiveness of “Lenoil”® SHP as a pharmaceutical agent for intensification of waste composting process with aged post-fermentation distillery grain, a qualitative evaluation of microbial consortium was carried out. Samples of both the untreated and the bacterial treated grain with “Lenoil”® SHP were taken for analysis. This agent includes microorganisms belonging to the genera Ochrobactrum sp. and Acinetobacter sp., which play a key role in the process of the breakdown of hydrocarbons for the intended purpose of the bioagent. The microorganisms of these genera are known for their high adaptability to diverse ecosystems and ability to efficiently degrade hydrocarbons and other organic compounds [7-10]. The use of the agent “Lenoil”® SHP for waste disposal of aged distillery grain is justified by the fact that microorganisms of the genus Acinetobacter sp. have excellent ability to reduce inorganic nitrogen [11-13]. Integration of the genera of Ochrobactrum sp. and Acinetobacter sp. in a microbial consortium can accelerate the decomposition of residues of distillary production, which is important for reducing environmental impact. The biopharmaceutical agent shows potential for the biodegradation of petroleum products and hydrocarbons, as well as in wastewater treatment. The effectiveness of the agent is due to the activity of specially selected strains of bacteria, which can effectively decompose a wide range of organic compounds. The use of this agent contributes not only to an improvement of the environmental situation, but also to a significant reduction in the costs of waste disposal and sewage treatment compared with traditional methods [14; 15]. The process of micro-organisms from the post-fermentation distillery grain was carried out on a nutritious farm followed by cultivation at temperatures of 30 and 50°C for 24 hours. To study the morphological and physio-biochemical characteristics of microorganisms, the following methods were applied: description of the morphology of colonies of microorganisms in a dense nutrient medium, Gram’s method staining, Nesser’s method staining, Cil-Nielsen’s method staining, Dugid’s method staining, Gray’s method staining, glycaemic and lipid addition staining, determination of enzymatic activity including proteolytic, catalytic activity, oxidative activity and ability to break down carbohydrates. Results and discussion In this study, a detailed comparative study of the microbial consortium of post-fermentation distillery grain was carried out before and after treatment with the bioagent. The traditional microbiological methods described in the Bergeyʼs Manual Handbook were used to establish the origin of isolated crops (Tables 1-3)[29]. Table 1. Morphology of colonies of microorganisms isolated from post-fermentation distillery grain Code Morphology of colonies on solid nutrient medium Before treatment A.1.1 Fine colony with a smooth surface and curved profile. It has a shiny white surface with a smooth edge. The structure is homogeneous, and the consistency is cream-like. The growth of colonies is observed on the surface of the nutrient medium A.1.2 Medium matte colony with a smooth curved surface. The structure of the colony is homogeneous, the consistency is paste-like, and the color is creamy. Colony growth is observed on the surface of the nutrient medium C 1.1 Medium irregularly shaped colony. The profile of the colony is flat with a shiny appearance. The color of the colony is yellow-white, and the edge is wavy. The structure of the colony is slender, and the consistency is paste-like. Colony growth is observed on the surface of the nutrient medium C.2.1 Large round colony with a frilled edge. The surface is smooth, and the profile is flat. The colony is shiny and white-yellow in color. The structure is homogeneous, the consistency is paste-like, with colony growth observed on the surface of the nutrient medium Ending of the Table 1 Code Morphology of colonies on solid nutrient medium C.3.1 Large round colony. The surface is smooth, and the profile is flat. It is white-gray in color. The structure is homogeneous, the consistency is paste-like. Colony growth is observed on the surface of the nutrient medium С.3.2 Medium opaque colony of creamy-yellow color. The colony is smooth, even, and convex with clear edges. Colony growth is observed on the surface of the nutrient medium C.4.1 Large round colony with a frilled edge. The surface is smooth, and the profile is flat. It is matte and gray-white in color. The structure is coarse-grained, the consistency is paste-like, with growth on the surface of the nutrient medium After treatment B.4.1 Large matte colony with a smooth surface. The color of the colony is yellow-white with an uneven edge. The structure of the colony is homogeneous, and the consistency is paste-like. Colony growth is observed on the surface of the nutrient medium D.1.1 Medium irregularly shaped colony. The profile of the colony is flat with a shiny appearance. The color of the colony is yellow-white, and the edge is wavy. The structure of the colony is slender, and the consistency is paste-like. Colony growth is observed on the surface of the nutrient medium D.2.2 Large round colony with a frilled edge. The surface is smooth, and the profile is flat. The colony is shiny and white-yellow in color. The structure is homogeneous, the consistency is paste-like, with colony growth observed on the surface of the nutrient medium D.2.3 Large round colony with a frilled edge. The surface is smooth, and the profile is flat, and the color is white. The structure is wavy, and the consistency is paste-like. Colony growth is observed within the nutrient medium D.3.1 Large round colony. The surface is smooth, and the profile is flat. It is white-gray in color. The structure is homogeneous, the consistency is paste-like. Colony growth is observed on the surface of the nutrient medium D.3.2 Medium opaque colony of creamy-yellow color. The colony is smooth, even, and convex with clear edges. Colony growth is observed on the surface of the nutrient medium D.4.2 Large round colony with a frilled edge. The surface is smooth, and the profile is flat. It is matte and grayish-white in color. The structure is coarse-grained, and the consistency is paste-like, with growth on the surface of the nutrient medium Source: compiled by Ya.M. Russkikh based on data from: Berkeley R et al. Bergeyʼs Manual of Determinative Bacteriology: in 2 volumes. Holt J (ed.); translated from English under the supervision of Corresponding Member of the Russian Academy of Sciences. Zavarzin GA. 9th ed. Moscow: Mir; 1997. Vol. 1, 429 p.; Vol. 2, 500 p. (In Russ.). Table 2. Morphological characteristics of microorganism cultures isolated from post-fermentation distillery grain Code Cell Shape Gram Staining Presence of Flagella Presence of Spores Presence of Inclusions Glycogen Volutin Lipids Capsules Before treatment A. 1.1 Bacilli - - - - - - - A. 1.2 Bacilli - + - - - - - C. 1.1 Bacilli - + - - + - - C. 2.1 Bacilli + + + - - - - C. 3.1 Bacilli - + - - - - + С. 3.2 Cocci + - - - - - - C. 4.1 Bacilli - + - - - - - After treatment B. 4.1 Bacilli - + - - + - - D. 1.1 Bacilli - + - - + - - D. 2.2 Bacilli + + + - - - - D. 2.3 Bacilli - - - - - - - D. 3.1 Bacilli - + - - - - + D. 3.2 Cocci + - - - - - - D. 4.2 Bacilli - + - - - - - Source: compiled by Ya.M. Russkikh based on data from: Berkeley R et al. Bergeyʼs Manual of Determinative Bacteriology: in 2 volumes. Holt J (ed.); translated from English under the supervision of Corresponding Member of the Russian Academy of Sciences. Zavarzin GA. 9th ed. Moscow: Mir; 1997. Vol. 1, 429 p.; Vol. 2, 500 p. (In Russ.). Table 3. Physiological and biochemical properties of microorganism cultures isolated from post-fermentation distillery grain Code Temperature tolerance Oxygen requirement Proteolytic activity Catalase activity Oxidase activity Carbohydrate fermentation ability Genus Glu-cose Mal-tose Suc-rose Lac-tose Before treatment A.1.1 Thermophiles Aerobes - + + + + + - Acidothermus sp. A.1.2 Thermophiles Facultative anaerobes - + - + + + - Proteus sp. C.1.1 Mesophiles Aerobes + + + - - - - Pseudomonas sp. C.2.1 Mesophiles Facultative anaerobes + + - + + + + Bacillus sp. C.3.1 Mesophiles Facultative anaerobes - + - + + + + Escherichia sp. С.3.2 Mesophiles Facultative anaerobes + + - + + - - Staphylococcus sp. C.4.1 Mesophiles Facultative anaerobes - + - + + + - Enterobacter sp. After treatment B.4.1 Thermophiles Aerobes - - - + - - - Ochrobactrum sp. D.1.1 Mesophiles Aerobes + + + - - - - Pseudomonas sp. D.2.2 Mesophiles Facultative anaerobes + + - + + + + Bacillus sp. D.2.3 Mesophiles Aerobes - + - + - - - Acinetobacter sp. D.3.1 Mesophiles Facultative anaerobes - + - + + + + Escherichia sp. D.3.2 Mesophiles Facultative anaerobes + + - + + - - Staphylococcus sp. D.4.2 Mesophiles Facultative anaerobes - + - + + + - Enterobacter sp. Source: compiled by Ya.M. Russkikh based on data from: Berkeley R et al. Bergeyʼs Manual of Determinative Bacteriology: in 2 volumes. Holt J (ed.); translated from English under the supervision of Corresponding Member of the Russian Academy of Sciences. Zavarzin GA. 9th ed. Moscow: Mir; 1997. Vol. 1, 429 p.; Vol. 2, 500 p. (In Russ.). At the initial stage of analysis, the following types of microorganisms were identified: Acidothermus sp., Proteus sp., Pseudomonas sp., Bacillus sp., Escherichia sp., Staphylococcus sp. и Enterobacter sp. After the application of the biopharmaceutical agent in samples of post-fermentation distelliry grain bacteria Ochrobactrum sp. and Acinetobacter sp. were found. These results indicate that the use of a biopharmaceutical agent not only supports existing populations of microorganisms, but also promotes infestation of the genera contained in the agent, that can significantly improve the functional characteristics of the microbial community towards intensification of microbial processes and survival. Studies have shown that the use of microorganisms Ochrobactrum sp. and Acinetobacter sp. has the potential to significantly reduce the time required for the organic compound decomposition process [11; 13; 16-18]. Conclusion The biopharmaceutical agent “Lenoil”® SHP is effective for improving the functional characteristics of microbial communities involved in the biodegradation of organic substances. The use of the agent in the post-fermentation distillery grain samples has increased the diversity of microorganisms by invading new genera of bacteria such as Ochrobactrum sp. and Acinetobacter sp. The use of the biopharmaceutical agent is a promising approach for the recycling of post-fermentation distillery grain, as it contributes not only to the maintenance of existing populations of micro-organisms, but also to the introduction of new species that accelerate the decomposition processes of organic wastes. This reduces the environmental burden while reducing waste disposal costs.
×

About the authors

Yana M. Russkikh

Samara State Technical University

Email: yzakieva@gmail.com
ORCID iD: 0000-0002-8653-0744
SPIN-code: 3817-0653

Ph.D. student of the Graduate School of Biotechnology

244 Molodogvardeyskaya St, Samara, 443100, Russian Federation

Danil N. Sherstobitov

Samara State Technical University

Author for correspondence.
Email: shersobitovdn@gmail.com
ORCID iD: 0000-0002-9160-5317
SPIN-code: 6822-4868

Ph.D. student of the Department of Chemical Technology and Industrial Ecology

244 Molodogvardeyskaya St, Samara, 443100, Russian Federation

Zinaida E. Mashchenko

Samara State Technical University

Email: mzinaida@yandex.ru
ORCID iD: 0000-0002-1357-1780
SPIN-code: 9878-0975

Cand. Sc. (Pharm.), Associate Professor of the Graduate School of Biotechnology

244 Molodogvardeyskaya St, Samara, 443100, Russian Federation

Vasiliy V. Ermakov

Samara State Technical University

Email: wassiliy@rambler.ru
ORCID iD: 0000-0001-7720-2418
SPIN-code: 5201-1408

Cand. Sc. (Tech.), Associate Professor of the Department of Chemical Technology and Industrial Ecology

244 Molodogvardeyskaya St, Samara, 443100, Russian Federation

Olga V. Tupitsyna

Samara State Technical University

Email: olgatupicyna@yandex.ru
ORCID iD: 0000-0003-0638-2700
SPIN-code: 4203-9529

Dr. Sc. (Tech.), Professor of the Department of Chemical Technology and Industrial Ecology

244 Molodogvardeyskaya St, Samara, 443100, Russian Federation

References

  1. Dyganova RYa, Belyaeva YuS. Development of method of selection of technologies of alcohol industry waste treatment as an instrument of ecological management. Izvestia of Samara Scientific Center of the Russian Academy of Sciences. 2014;4(2):1728-1736. (In Russ.). EDN: TKPQVX
  2. Agafonov GV, Zueva NV, Kljuchnikov AI, Yakovlev AN. The comparative characteristic of possible technologies on processing after-ethanol bards. Proceedings of the Voronezh State University of Engineering Technologies. 2012;3(53):107-110. (In Russ.). EDN: PJHXMX
  3. Kuznecov IN, Rychai NS. The analysis of world experience in processing of alcohol stillage. Proceedings of BSTU. 2010;1(4):294-301. (In Russ.). EDN: SJLBZP
  4. Vinarov AYu, Kukharenko AA, Nikolajkina NE. Zero-waste biotechnology of ethanol production. Moskva: URAIT; 2019. 272 p. (In Russ.). EDN: XBXFXJ
  5. Pystin VN, Gubar EV, Tupitsyna OV, Bykov DE, Chertes KL. Waste Disposal and Elimination of the Object of Accumulated Harm in a Specially Protected Natural Area. Ecology and Industry of Russia. 2022;26(5):22-27. (In Russ.). https://doi.org/10.18412/1816-0395-2022-5-22-27 EDN: MCJEYU
  6. Sherstobitov DN, Ermakov VV, Vasilyev AV, Pystin VN, Bykov DE. Decontamination of aged alcohol bardplaced in ground depositories. Izvestia of Samara Scientific Center of the Russian Academy of Sciences. 2024;24(1):135-140. (In Russ.). https://doi.org/10.37313/1990-5378-2024-26-1-135-140 EDN: LFPWHZ
  7. Carvalho М, Bento de Carvalho T, Barbosa JB, Teixeira P, Bergogne-Bérézin E. Acinetobacter. Encyclopedia of Food Safety (second edition). 2024;58-67. https://doi.org/10.1016/B978-0-12-822521-9.00212-4.
  8. Mujumdar Sh, Bhoyar J, Akkar A, Hundekar Sh, Agnihotri N, Jaybhay P, Bhuyan S. Acinetobacter: A versatile plant growth-promoting rhizobacteria (PGPR). Plant-Microbe Interaction - Recent Advances in Molecular and Biochemical Approaches. Volume 1: Overview of Biochemical and Physiological Alteration During Plant-Microbe Interaction. 2023;327-362. https://doi.org/10.1016/B978-0-323-91875-6.00009-8.
  9. Ryan MP, Pembroke JT. The genus Ochrobactrum as major opportunistic pathogens. Microorganisms. 2020;8(11):1797. https://doi.org/10.3390/microorganisms8111797.
  10. Korshunova TYu, Kuzina EV, Sharipov DA, Rafikova GF. Bacteria of the genera Acinetobacter and Ochrobactrum in the processes of bioremediation of oil-contaminated objects (review). Theoretical and Applied Ecology. 2021;3:13-20. (In Russ.). https://doi.org/10.25750/1995-4301-2021-3-013-020 EDN: ZBRDON
  11. Zhao T, Chen P, Zhang L, Zhang L, Gao Ya, Ai Sh, Liu H, Liu X. Heterotrophic nitrification and aerobic denitrification by a novel Acinetobacter sp. TAC-1 at low temperature and high ammonia nitrogen. Bioresource Technology. 2021;339:125620. https://doi.org/10.1016/j.biortech.2021.125620 EDN: UVKFWI
  12. Wu L, Ding X, Lin Ya, Lu X, Lv H, Zhao M, Yu R. Nitrogen removal by a novel heterotrophic nitrification and aerobic denitrification bacterium Acinetobacter calcoaceticus TY1 under low temperatures. Bioresource Technology. 2022;353:127148. https://doi.org/10.1016/j.biortech.2022.127148 EDN: DHHNVT
  13. Yang L, He T, Chen M, Zhang M, Yang L, Zheng Ch, Wang C. Excellent phenol removal ability of Acinetobacter guillouiae BY18 under different inorganic nitrogen conditions. Environmental Technology & Innovation. 2024;35:103694. https://doi.org/10.1016/j.eti.2024.103694.
  14. Tavadze BD, Belokurova EV. The use of bioremediation in laboratory conditions for cleaning soils contaminated with petroleum products and its economic efficiency. Advances in Current natural Sciences. 2024;5:84-89. (In Russ.). https://doi.org/10.17513/use.38270.
  15. Kobyzeva NV. Local purification of industrial wastewater using the biopreparation “Lenoil” [dissertation]. Ufa: Institute of Biology, Ufa Scientific Center of the Russian Academy of Sciences, 2009. (In Russ.).
  16. Wen G, Wang T, Li K, Wang H, Wang J, Huang T. Aerobic denitrification performance of strain Acinetobacter johnsonii WGX-9 using different natural organic matter as carbon source: Effect of molecular weight. Water Research. 2019;164:114956. https://doi.org/10.1016/j.watres.2019.114956
  17. Jiang W, Chen R, Duan Ya, Wang H, Yan H, Shen X, Chen X, Yin Ch, Mao Zh. Isolation of phloridzin-degrading, IAA-producing bacterium Ochrobactrum haematophilum and its effects on the apple replant soil environment. Horticultural Plant Journal. 2023;9(2):199-208. https://doi.org/10.1016/j.hpj.2022.08.010 EDN: LJVOMX
  18. Feritas JF, Silva DFL, Castro JNF, Agnez-Lima LF. Genomic and phenotypic characterization of novel Ochrobactrum species isolated from Brazilian oil reservoirs: genomic diversity and bioremediation potential. Process Biochemistry. 2025;149:74-84. https://doi.org/10.1016/j.procbio.2024.11.036 EDN: SNNRZS

Supplementary files

Supplementary Files
Action
1. JATS XML

Copyright (c) 2025 Russkikh Y.M., Sherstobitov D.N., Mashchenko Z.E., Ermakov V.V., Tupitsyna O.V.

Creative Commons License
This work is licensed under a Creative Commons Attribution-NonCommercial 4.0 International License.